Rainville, L., S. R. Jayne, and M. F. Cronin, 2014: Variations of the North Pacific subtropical mode water from direct observations.  Journal of Climate, Vol. 27, pp.  2842-2860.

Jochum, M., B. P. Briegleb, G. Danabasoglu, W. G. Large, N. J. Norton, S. R. Jayne, M. H. Alford, and F. O. Bryan, 2013: The impact of oceanic near-inertial waves on climate.  Journal of Climate, Vol. 26, pp. 2833-2844.

Rypina, I. I., S. R. Jayne, S. Yoshida, A. M. Macdonald, E. Douglass, and K. Buesseler, 2013: Short-term dispersal of Fukushima-derived radionuclides off Japan: Modeling efforts and model-data intercomparison.  Biogeosciences, Vol. 10, pp. 1517-1550.

Sun, O. M., S. R. Jayne, K. L. Polzin, B. A. Rahter, and L. St. Laurent, 2013: Scaling turbulent dissipation in the transition layer.  Journal of Physical Oceanography, Vol. 43, pp. 2475-2489.

Charette, M. A., C. F. Breier, P. B. Henderson, S. M. Pike, I. I. Rypina, S. R. Jayne, and K. O. Buesseler, 2013: Radium-based estimates of cesium isotope transport and total direct ocean discharges from the Fukushima Nuclear Power Plant accident. Biogeosciences, Vol. 10, pp. 2159-2167.

Mrvaljevic, R. K., P. G. Black, L. R. Centurioni, Y. T. Chang, E. A. D’Asaro, S. R. Jayne, C. M. Lee, R. C. Lien, I. I. Lin, J. Morzel, P. P. Niller, L. Rainville, and T. B. Sanford, 2013: Observations of the cold wake of Typhoon Fanapi (2010).  Geophysical Research Letters, Vol. 40, pp. 316-321.

Trossman, D. S., B. K. Arbic, S. T. Garner, J. A. Goff, S. R. Jayne, E. J. Metzger, and A. J. Wallcraft, 2013: Impact of parameterized lee wave drag on the energy budget of an eddying global ocean model.  Ocean Modelling, Vol. 72, pp. 119-142.

Cronin, M. F., N. A. Bond, J. T. Farrar, H. Ichikawa, S. R. Jayne, Y. Kawai, M. Konda, B. Qiu, L. Rainville, and H. Tomita, 2013: Formation and erosion of the seasonal thermocline in the Kuroshio Extension Recirculation Gyre.  Deep Sea Research, Vol. 85, pp. 62-74.

Douglass, E. M., Y. Kwon, and S. R. Jayne, 2013: A comparison of North Pacific and North Atlantic subtropical mode waters in a climatologically-forced model.  Deep Sea Research, Vol. 91, pp. 139-151.

Danabasoglu, G., S. C. Bates, B. P. Briegleb, S. R. Jayne, M. Jochum, W. G. Large, S. Peacock, and S. G. Yeager, 2012: The CCSM4 ocean component.  Journal of Climate, Vol. 25, pp. 1361-1389.

Douglass, E. M., S. R. Jayne, S. Peacock, F. O. Bryan, and M. Maltrud, 2012: Subtropical mode water variability in a climatologically forced model in the Northwestern Pacific Ocean.  Journal of Physical Oceanography, Vol. 42, pp. 126-140.

Bates, S. C., B. Fox-Kemper, S. R. Jayne, W. G. Large, S. Stevenson and S. G. Yeager, 2012: Mean biases, variability, and trends in air-sea fluxes and sea surface temperature in the CCSM4.  Journal of Climate, Vol. 25, pp. 7781-7801.

Douglass, E. M., S. R. Jayne, F. O. Bryan, S. Peacock, and M. Maltrud, 2012: Kuroshio pathways in a climatologically forced model.  Journal of Oceanography, Vol. 68, pp. 625-639.

Waterman, S., and S. R. Jayne, 2012: Eddy-driven recirculations from a localized transient forcing. Journal of Physical Oceanography, Vol. 42, pp. 430-447.

D’Asaro, E., P. Black, L. Centurioni, P. Harr, S. Jayne, I. I. Lin, C. Lee, J. Morzel, R. Mrvaljevic, P. P. Niiler, L. Rainville, T. Sanford, and T. Y. Tang, 2011: Typhoon-ocean interaction in the western North Pacific: Part 1.  Oceanography, Vol. 24, pp. 24-31.

Gent, P. R., G. Danabasoglu, L. J. Donner, M. M. Holland, E. C. Hunke, S. R. Jayne, D. M. Lawrence, R. B. Neale, P. J. Rasch, M. Vertenstein, P. H. Worley, Z. Yang, and M. Zhang, 2011: The Community Climate System Model Version 4.  Journal of Climate, Vol. 24, pp. 4973-4991.

Waterman, S., and S. R. Jayne, 2011: Eddy-mean flow interactions in the along-stream development of a western boundary current jet: An idealized model study.  Journal of Physical Oceanography, Vol. 41, pp. 682-707.

Smith, R., P. Jones, B. Briegleb, F. Bryan, G. Danabasoglu, J. Dennis, J. Dukowicz, C. Eden, B. Fox-Kemper, P. Gent, M. Hecht, S. Jayne, M. Jochum, W. Large, K. Lindsay, M. Maltrud, N. norton, S. Peacock, M. Vertenstein, and S. Yeager, 2010: The Parallel Ocean Program (POP) reference manual: Ocean component of the Community Climate System Model (CCSM). Los Alamos National Laboratory, LAUR-10-01853.

Canuto, V. M., A. M. Howard, Y. Cheng, C. J. Muller, A. Leboissetier, and S. R. Jayne, 2010: Ocean turbulence, III: New GISS vertical mixing scheme.  Ocean Modelling, Vol. 34, pp. 70-91.

Shum, C., et al., 2010: Geodetic observations of the ocean surface topography, geoid, currents and changes in ocean mass and volume.  In Proceedings of OceanObs09: Sustained Ocean Observations and Information for Society, J. Hall, D. E. Harrison, and D. Stammer eds, ESA Publication WPP-306, Vol2, pp. 21-25.

Dushaw, B., W. Au, A. Beszczynska-Möller, R. Brainard, B. D. Cornuelle, J. Gould, B. Howe, S. R. Jayne, O. M. Johannessen, J. F. Lynch, D. Martin, D. Menemenlis, P. Mikhalevsky, J. H. Miller, S. E. Moore, W. H. Munk, R. I. Odom, J. Orcutt, T. Rossby, and H. Sagen, 2010: A global ocean acoustic observing network.  In Proceedings of OceanObs09: Sustained Ocean Observations and Information for Society, J. Hall, D. E. Harrison, and D. Stammer eds, ESA Publication WPP-306, Vol. 2.

Jayne, S. R., N. G. Hogg, S. N. Waterman, L. Rainville, K. A. Donohue, D. R. Watts, K. L. Tracey, J. L. McClean, M. E. Maltrud, B. Qui, S. Chen, and P. Hacker, 2009:  The Kuroshio Extension and its recirculation gyres.  Deep Sea Research, Vol. 56, pp. 2088-2099.

Jayne, S. R., 2009:  The impact of abyssal mixing parameterizations in an ocean general circulation model.  Journal of Physical Oceanography, Vol. 39, pp. 1756-1775.

Qiu, B., S. Chen, P. Hacker, N. G. Hogg, S. R. Jayne, and H. Sasaki, 2008: The Kuroshio Extension northern recirculation gyre: Profiling float measurements and forcing mechanism.  Journal of Physical Oceanography, Vol. 38, pp. 1764-1779.

Donohue, K., et al., 2008: Program studies the Kuroshio Extension. Eos, Transactions American Geophysical Union, Vol. 89, pp. 161-162.

Park, J. H., D. R. Watts, A. Donohue, and S. R. Jayne, 2008:  A comparison of in situ bottom pressure array measurements with GRACE estimates in the Kuroshio Extension.  Geophysical Research Letters, Vol. 35, L17601.

Montenegro, Á., M. Eby, A. J. Weaver, and S. R. Jayne, 2007: Response of a climate model to tidal mixing parameterization under present day and last glacial maximum conditions.  Ocean Modelling, Vol. 19, pp. 125-137.

Rainville, L., S. R. Jayne, J. L. McClean, and M. E. Maltrud, 2007: Formation of subtropical mode water in a high-resolution ocean simulation of the Kuroshio Extension region.  Ocean Modelling, Vol. 17, pp. 338-356.

Jayne, S. R., 2006: The circulation of the North Atlantic Ocean from altimetry and the GRACE geoid.  Journal of Geophysical Research, Vol. 111, C03005.

Qiu, B., P. Hacker, S. Chen, K. A. Donohue, D. R. Watts, H. Mitsudera, N. G. Hogg, and S. R. Jayne, 2006: Observations of the subtropical mode water evolution from the Kuroshio Extension System Study.  Journal of Physical Oceanography, Vol. 36, pp. 457-473.

Sandwell, D. T., W. H. F. Smith, S. Gille, E. Kappel, S. Jayne, K. Soofi, B. Coakley, and L. Geli, 2006: Bathymetry from space: Rationale and requirements for a new, high-resolution altimetric mission. Comptes Rendus Geoscience, Vol. 338, pp. 1049-1062.

Simmons, H. L., S. R. Jayne, L. St. Laurent, and A. J. Weaver, 2004: Tidally driven mixing in a numerical model of the ocean general circulation. Ocean Modelling, Vol. 6, pp. 245-263.

Scott, E. C., et al. 2004: The Morphology of Steve. Annals of Improbable Research, July/August, pp. 24-29.

Jayne, S. R., L. St. Laurent, and S. T. Gille, 2004: Connections between ocean bottom topography and Earth’s climate.  Oceanography, Vol. 17, pp. 65-74.

Jayne, S. R., J. M. Wahr, and F. O. Bryan, 2003: Observing ocean heat content using satellite gravity and altimetry.  Journal of Geophysical Research, Vol. 108, 3031.

Jayne, S. R., and J. Marotzke, 2002: The oceanic eddy heat transport.  Journal of Physical Oceanography, Vol. 32, pp. 3328-3345.

Munk, W., M. Dzieciuch, and S. Jayne, 2002: Millennial climate variability: Is there a tidal connection? Journal of Climate, Vol. 15, pp. 370-385.

St. Laurent, L., H. L. Simmons, and S. R. Jayne, 2002: Estimating tidally driven mixing in the deep ocean.  Geophysical Research Letters, Vol. 29(21), pp. 1-4.

Wahr, J. M., S. R. Jayne, and F. O. Bryan, 2002: A method of inferring changes in deep ocean currents from satellite measurements of time variable gravity. Journal of Geophysical Research, Vol. 107, 3218.

Jayne, S. R., and J. Marotzke, 2001: The dynamics of ocean heat transport variability.  Reviews of Geophysics, Vol. 39, pp. 385-411.

Jayne, S. R., and L. St. Laurent, 2001: Parameterizing tidal dissipation over rough topography. Geophysical Research Letters, Vol. 28, pp. 811-814.

Sandwell, D. T., W. H. F. Smith, S. Gille, S. R. Jayne, K. Soofi and B. Coakley, 2001: Bathymetry from space: White paper in support of a high-resolution, ocean altimeter mission, in report of The High-Resolution Ocean Topography Science Working Group Meeting, ed. D. B. Chelton.

Jayne, S. R., and N. G. Hogg, 1999: On recirculation forced by an unstable jet.  Journal of Physical Oceanography, Vol. 29, pp. 2711-2718.

Jayne, S. R., 1999: Dynamics of global ocean heat transport variability. Sc.D. Thesis from the Massachusetts Institute of Technology/Woods Hole Oceanographic Institution Joint Program, Woods Hole, Massachusetts.

Jayne, S. R., and J. Marotzke, 1999: A destabilizing thermohaline circulation – atmosphere – sea ice feedback. Journal of Climate, Vol. 12, pp. 642-651.

Jayne, S. R., and R. Tokmakian, 1997: Forcing and sampling of ocean general circulation models: Impact of high-frequency motions. Journal of Physical Oceanography, Vol. 27, pp. 1173-1179.

Jayne, S. R., N. G. Hogg and P. Malanotte-Rizzoli, 1996: Recirculation gyres forced by a beta plane jet.  Journal of Physical Oceanography, Vol. 26, pp. 492-504.

Jayne, S. R., 1994: Dynamics of a Beta Plane Jet. S. B. Thesis from the Massachusetts Institute of Technology, Cambridge, Massachusetts.